Gene annotation analysis for gene model and function in a genome assembly:

Input:
genome assembly in .fasta format

Methods:
ab initio, RNA-Seq, and homology-based gene model prediction;
Gene function analysis against Databases (KEGG, GO, Nr, TrEMBLE, SwissProt, PFAM, COG, EggNogg, ...)

Time: 

 2 weeks

Output:

Gene model annotation output in .gff3 format,
gene encoded protein sequences in .fasta file, .protein.aa.fa
transcript sequences of genes in .fasta file, .condingSeq.fa,

Gene function annotation in a tabular text .tsv file,
a report table with the summary of genes

Delivery:
Results are provided online for users to download